I don't know a tool (if someone would like to program it I could provide all the information), but I do have the largest list of free search engine submission links here - http://www.trafficflowseo.com/2008/03/free-search-engine-submission-links.html. Happy submitting...
Submitting to search engines is something you'd do if you had loads of time to spare, and no idea what to do with it. It is their job to find us, not our job to go to them
Here you go, free program: http://www.tareeinternet.com/forum/free-scripts/375-search-engine-submitter-free-tool.html