My highest backlink is from last.fm PR7 and thats the only backlink that alexa see but google webmasters only show PR0 - 5 backlinks to my site @ www.ldm.hr , i have about 10 connections from lastfm and every site that g.webm. show have maximum 2 connections , can it be because of that ? Thank You
They never show all your backlinks in google webmaster tools. You would get a better look at siteexplorer.yahoo.com, but even they aren't perfect.
No, you will not be able to see lot of backlinks in webmaster google. If you have firefox, then find the addon called SEO-Quake and install it. This addon will help you to show all the backlinks and you can even compare, how many google as well as yahoo shows in the list.
that only updates like once or twice a month, google yahoo site explorer and use that for your backlinks.
Google webmaster tool list the links that Googlebot finds during its crawling and indexing process. Also, it displays the most common link sources and the pages on your site with the most links. If users reach a page on your site as a result of clicking a link with a redirect, that intermediate link will also be listed. This google webmaster page is explaining which links are listed in results Source: Google webmaster central http://www.google.com/support/webmasters/bin/answer.py?answer=55281
yes its true that google webmaster tools doesn't show all of your links but again it shows those links that adds credit to your link popularity.
webmaster tools does not show anywhere near all of your links. It's not because it's a PR7 they just don't show them all. In fact they use to claim that you wouldn't see them unless they are PR4 and up but they do however show low PR back links too. Backlinkwatch.com is a good place for checking back links.