What aspect of e-commerce -- server configuration? Selling online? Products? With all the information available online for free, that may be a better avenue. Better off selecting a business degree in College/University -- then use those skills to build the e-commerce site.
I would expect all universities that have a business school (all?) to have papers covering ecommerce. Given that you are in India perhaps you should just look at Universities that are local to you. You might be happy to travel but Harvard isn't really feasible unless you have oodles of money.
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I don't think they even teach e-Commerce. If you want get a degree in Business/Commerce and then do research online about eCommerce and use those skills from your business degree to help you. Otherwise you could probably learn everything you need to know online for free without getting any degree.
Of course there are good prospects for the e-commerce field. Foot traffic this holiday season are expected to drop 2.2 percent in the USA due to the popularity of shopping online. I only know of one college that offers a degree program in e-commerce. Go to http://flcc.edu/academics/ecommerce/index.cfm FLCC is a fully accredited school and is also a member of the State University of New York (a very reputable educational system in the northeast).